Not that I know of.Just tested this and ~~NOTOC~~ gets rid of both the standard table of contents and the one generated by {{INLINETOC}} (which is specified on the plugin page). So right now you either double up your table of contents or just don't have one at all.
Is there a way to hide the normal table of contents without ~~NOTOC~~? The plugin article says something about needing additional modifications to hide the dokuwiki standard table of contents.
Not that I know of.
That's good to know. Would hate to see NTSE people have to fight with submitters who use "WRAP right" in the place of the ToC on long articles then say "lol I have a ToC it's at the bottom it's technically there!"Knowing that this plugin sounds redundant. Also I want the TOC in the same place on every page for the sake of consistency and ease of navigation.