I've forgoton if I've brought this up already but if you have transphasic torpedoes it's likely your ships have transphasic cloacking as well (think the Pegasus afair). Also you might want to clarify what sort of FTL travel your ships use, and clarify what type of beam weapon they uses (saying disrupter and blaster doesn't help because most people won't know how these works, and the working of phasers and disrupters have always confused me).
Types of FTL are: Continuum Distortion Drive, Hyperspatial Fold Generator, Transuniversal Teleportation Device, Wormhole-tech, and several others I can't think of right now.
Types of beam weapons are: masers, xasers, phasing beams, aetheric beams and anything else you can think of and give some explanation for